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  5. Msp_g15059

Msp_g15059 (GLR3.3, ATGLR3.3)


Aliases : GLR3.3, ATGLR3.3

Description : ligand-gated cation channel *(GLR) & original description: none


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15059
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00050250 GLUR3, GLR3.4,... Solute transport.channels.GLR ligand-gated cation channel 0.08 OrthoFinder output from all 47 species
AT2G29110 GLR2.8, ATGLR2.8 glutamate receptor 2.8 0.03 OrthoFinder output from all 47 species
AT2G29120 GLR2.7, ATGLR2.7 glutamate receptor 2.7 0.03 OrthoFinder output from all 47 species
AT3G04110 ATGLR1.1, GLR1.1, GLR1 glutamate receptor 1.1 0.03 OrthoFinder output from all 47 species
AT5G48400 ATGLR1.2, GLR1.2 Glutamate receptor family protein 0.02 OrthoFinder output from all 47 species
Als_g19413 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene63338.t1 GLR2.8,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G069800.1 GLUR3, GLR3.4,... ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g38984 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022297001 GLR3.6, ATGLR3.6 Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
GSVIVT01030602001 GLUR3, GLR3.4, ATGLR3.4 Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
GSVIVT01033142001 GLR2.8, ATGLR2.8 Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
GSVIVT01033150001 GLR2.7, ATGLR2.7 Solute transport.channels.GLR ligand-gated cation channel 0.04 OrthoFinder output from all 47 species
GSVIVT01033155001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
GSVIVT01033156001 GLR2.8, ATGLR2.8 Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
Gb_09070 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
Gb_20613 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
Gb_39754 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
LOC_Os06g08900.1 GLR2.5,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
LOC_Os07g01310.1 GLUR3, GLR3.4,... ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
Msp_g37146 ATGLR3.2,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15691 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c15_25650V3.1 GLR3.3,... glutamate receptor 3.3 0.01 OrthoFinder output from all 47 species
Solyc06g063170.3.1 GLR2.8,... ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
Zm00001e009848_P001 ATGLR2.9,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 487 807
IPR001828 ANF_lig-bd_rcpt 49 404
IPR001320 Iontro_rcpt_C 808 838
No external refs found!