Msp_g14979 (EST3, MRP4, ATMRP4, ABCC4)

Aliases : EST3, MRP4, ATMRP4, ABCC4

Description : not classified & original description: none

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g14979

Target	Alias	Description	ECC score	Gene Family Method
Adi_g056548	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g15090	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g33144	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g05096	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g22920	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g14039	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g70285	MRP9, ABCC9, ATMRP9	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.23G084100.1	MRP6, ATMRP6,...	subfamily ABCC transporter & original description:...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020684.9	ABCC1, ATABCC1,...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Dac_g05534	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g08766	AtABCC2, ABCC2,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g12889	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g27864	ABCC3, ATMRP3, MRP3	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g31128	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g18000	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g10564	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g21603	MRP10, ATMRP10, ABCC14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01014631001	ABCC3, ATMRP3, MRP3	ABC transporter C family member 3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01021595001	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Gb_39319	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os04g13210.1	MRP10, ATMRP10,...	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
MA_10436190g0030	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_10436190g0040	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_138036g0010	ABCC3, ATMRP3, MRP3	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
MA_491683g0020	MRP15, ABCC15, ATMRP15	ABC transporter C family member 8 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_635466g0010	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp4g15590.1	ATMRP14, ABCC10, MRP14	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Mp5g13220.1	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Smo107555	MRP15, ABCC15, ATMRP15	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo94	ATMRP12, MRP12, ABCC11	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Zm00001e038918_P002	ABCC3, ATMRP3,...	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	18	199

External Links

No external refs found!

Msp_g14979 (EST3, MRP4, ATMRP4, ABCC4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation