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  5. Msp_g14880

Msp_g14880 (E2FB, ATE2FB, E2F1)


Aliases : E2FB, ATE2FB, E2F1

Description : E2F-type transcription factor & original description: none


Gene families : OG0001575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001575_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g14880
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00231260 E2FB, ATE2FB,... RNA biosynthesis.transcriptional activation.E2F/DP... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021352.42 No alias RNA biosynthesis.transcriptional activation.E2F/DP... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000136 E2FB, ATE2FB, E2F1 E2F-type transcription factor & original description: CDS=37-687 0.03 OrthoFinder output from all 47 species
Solyc06g074010.3.1 E2FB, ATE2FB,... E2F cell cycle interphase transcription factor.... 0.04 OrthoFinder output from all 47 species
Solyc11g068800.2.1 E2FB, ATE2FB,... E2F cell cycle interphase transcription factor.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR003316 E2F_WHTH_DNA-bd_dom 178 241
IPR032198 E2F_CC-MB 256 356
No external refs found!