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Description : E3 ubiquitin ligase component *(Doa10) of ER-associated protein degradation (ERAD) machinery & original description: none
Gene families : OG0001940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001940_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g14771 | |
| Cluster | HCCA: Cluster_63 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ceric.22G052000.1 | Ceric.22G052000 | E3 ubiquitin ligase component *(Doa10) of ER-associated... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_37944 | No alias | ubiquitin ligase component Doa10 of ER-associated... | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g15190.1 | No alias | ubiquitin ligase component Doa10 of ER-associated... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g38213 | No alias | E3 ubiquitin ligase component *(Doa10) of ER-associated... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g12254 | No alias | E3 ubiquitin ligase component *(Doa10) of ER-associated... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011016 | Znf_RING-CH | 30 | 73 |
| No external refs found! |