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  5. Msp_g14768

Msp_g14768


Description : multifunctional scaffold component *(ATG11) of ATG1-13 autophagosome assembly control complex & original description: none


Gene families : OG0003054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003054_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g14768
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Aop_g10956 No alias multifunctional scaffold component *(ATG11) of ATG1-13... 0.04 OrthoFinder output from all 47 species
Cre16.g651350 No alias Autophagy-related protein 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ehy_g18832 No alias multifunctional scaffold component *(ATG11) of ATG1-13... 0.03 OrthoFinder output from all 47 species
Lfl_g03491 No alias multifunctional scaffold component *(ATG11) of ATG1-13... 0.03 OrthoFinder output from all 47 species
MA_787g0010 No alias multifunctional scaffold component ATG11 of ATG1-13... 0.03 OrthoFinder output from all 47 species
Ore_g10816 No alias multifunctional scaffold component *(ATG11) of ATG1-13... 0.02 OrthoFinder output from all 47 species
Pnu_g08146 No alias multifunctional scaffold component *(ATG11) of ATG1-13... 0.03 OrthoFinder output from all 47 species
Solyc07g005970.3.1 Solyc07g005970 multifunctional scaffold component ATG11 of ATG1-13... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR045326 ATG17-like_dom 147 481
No external refs found!