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  5. Msp_g14610

Msp_g14610 (ATGCN5, GCN5)


Aliases : ATGCN5, GCN5

Description : not classified & original description: none


Gene families : OG0003045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g14610

Target Alias Description ECC score Gene Family Method Actions
AT5G64840 ATGCN5, GCN5 general control non-repressible 5 0.11 OrthoFinder output from all 47 species
Adi_g057121 ATGCN5, GCN5 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g05120 ATGCN5, GCN5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04195 ATGCN5, GCN5 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g16234 ATGCN5, GCN5 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g07329 ATGCN5, GCN5 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene62480.t1 ATGCN5, GCN5,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0168.g054635 ATGCN5, GCN5 not classified & original description: CDS=239-2245 0.09 OrthoFinder output from all 47 species
Cba_g38272 ATGCN5, GCN5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.29G008900.1 ATGCN5, GCN5,... not classified & original description: pacid=50624672... 0.17 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001085.32 ATGCN2, GCN2 ABC transporter F family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre06.g265100 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre06.g271850 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre08.g372250 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g12683 ATGCN5, GCN5 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g07651 ATGCN5, GCN5 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ehy_g07834 ATGCN5, GCN5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022235001 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_01082 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Gb_01083 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os11g39020.1 ATGCN5, GCN5,... ABC transporter F family member 5 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
Len_g13114 ATGCN5, GCN5 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Lfl_g07903 ATGCN5, GCN5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10437027g0010 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Mp7g11090.1 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g11528 ATGCN5, GCN5 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pir_g09728 ATGCN5, GCN5 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g11340 ATGCN5, GCN5 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g15434 ATGCN5, GCN5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020515 ATGCN5, GCN5 not classified & original description: CDS=75-2189 0.02 OrthoFinder output from all 47 species
Solyc04g051800.3.1 ATGCN5, GCN5,... ABC transporter F family member 5 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
Spa_g18685 ATGCN5, GCN5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11682 ATGCN5, GCN5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e011297_P001 ATGCN5, GCN5,... ABC transporter F family member 5 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 465 595
IPR032781 ABC_tran_Xtn 350 437
IPR003439 ABC_transporter-like_ATP-bd 136 311
No external refs found!