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  5. Msp_g14501

Msp_g14501 (CHA19, CHR19, ETL1)


Aliases : CHA19, CHR19, ETL1

Description : ATPase component *(Etl1) & original description: none


Gene families : OG0005169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g14501

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00033620 CHA19, CHR19,... Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Aev_g15061 CHA19, CHR19, ETL1 ATPase component *(Etl1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63137 CHA19, CHR19, ETL1 ATPase component *(Etl1) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0010.g012267 CHA19, CHR19, ETL1 ATPase component *(Etl1) & original description: CDS=1-2631 0.06 OrthoFinder output from all 47 species
Cba_g23825 CHA19, CHR19, ETL1 ATPase component *(Etl1) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03887 CHA19, CHR19, ETL1 ATPase component *(Etl1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428934g0010 CHA19, CHR19, ETL1 Protein CHROMATIN REMODELING 19 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g014770.3.1 CHA19, CHR19,... chromatin remodeling factor (Etl1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140658 ATP-dependent chromatin remodeler activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 287 587
IPR001650 Helicase_C 657 769
No external refs found!