Msp_g14438 (DRD2, NRPE2, NRPD2A,...)


Aliases : DRD2, NRPE2, NRPD2A, NRPD2, DMS2

Description : component *(NRPE2) of RNA polymerase V complex & original description: none


Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g14438

Target Alias Description ECC score Gene Family Method Actions
AT3G23780 DRD2, NRPE2,... nuclear RNA polymerase D2A 0.02 OrthoFinder output from all 47 species
Aspi01Gene47963.t1 NRPC2, Aspi01Gene47963 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0115.g046267 NRPC2 component *(NRPC2) of RNA polymerase III complex &... 0.04 OrthoFinder output from all 47 species
Dac_g06906 EMB1989, RPB2, NRPB2 component *(NRPB2) of RNA polymerase II complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007189 DRD2, NRPE2,... not classified & original description: CDS=512-4159 0.02 OrthoFinder output from all 47 species
Smo148107 EMB1989, RPB2, NRPB2 RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.02 OrthoFinder output from all 47 species
Spa_g20348 EMB1989, RPB2, NRPB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR007641 RNA_pol_Rpb2_7 1118 1209
IPR007644 RNA_pol_bsu_protrusion 37 489
IPR007646 RNA_pol_Rpb2_4 619 679
IPR007645 RNA_pol_Rpb2_3 522 584
IPR007647 RNA_pol_Rpb2_5 705 748
IPR007642 RNA_pol_Rpb2_2 307 449
IPR007120 DNA-dir_RNAP_su2_dom 756 1116
No external refs found!