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  5. Msp_g14403

Msp_g14403


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g14403

Target Alias Description ECC score Gene Family Method Actions
Adi_g014360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15766 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01606 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g03408 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g63826 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g67674 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0303.g063784 No alias not classified & original description: CDS=1-1617 0.06 OrthoFinder output from all 47 species
Dac_g43238 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os07g39090.1 LOC_Os07g39090 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g16975 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48694 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007853 No alias not classified & original description: CDS=1-1137 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010845 No alias not classified & original description: CDS=1-381 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021978 No alias not classified & original description: CDS=1-2700 0.06 OrthoFinder output from all 47 species
Sam_g36339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo181046 No alias Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Smo25177 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Smo92456 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc05g023900.1.1 Solyc05g023900 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Tin_g25572 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g27069 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e015695_P001 Zm00001e015695 Pentatricopeptide repeat-containing protein At4g16835,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 170 193
IPR002885 Pentatricopeptide_repeat 139 169
IPR002885 Pentatricopeptide_repeat 111 138
IPR002885 Pentatricopeptide_repeat 645 670
IPR002885 Pentatricopeptide_repeat 242 263
IPR002885 Pentatricopeptide_repeat 570 618
IPR002885 Pentatricopeptide_repeat 369 416
IPR002885 Pentatricopeptide_repeat 268 315
IPR002885 Pentatricopeptide_repeat 469 517
No external refs found!