Msp_g14224 (HY3, OOP1, PHYB)

Aliases : HY3, OOP1, PHYB

Description : temperature sensor protein *(PHY-B) & original description: none

Gene families : OG0000699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g14224

Target	Alias	Description	ECC score	Gene Family Method
AT1G09570	FHY2, HY8, PHYA, FRE1	phytochrome A	0.03	OrthoFinder output from all 47 species
AT4G18130	PHYE	phytochrome E	0.03	OrthoFinder output from all 47 species
Aob_g02397	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g16813	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g07141	HY3, OOP1, PHYB	phytochrome photoreceptor *(PHY) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g30879	HY3, OOP1, PHYB	phytochrome photoreceptor *(PHY) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g35990	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g09246	HY3, OOP1, PHYB	phytochrome photoreceptor *(PHY) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g24706	No alias	temperature sensor protein *(PHY-B) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g059870.4.1	HY3, OOP1, PHYB,...	phytochrome photoreceptor (PHY). temperature sensor...	0.03	OrthoFinder output from all 47 species
Spa_g14459	FHY2, HY8, PHYA, FRE1	phytochrome photoreceptor *(PHY) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g47597	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001462_P001	HY3, OOP1, PHYB,...	phytochrome photoreceptor (PHY). temperature sensor...	0.03	OrthoFinder output from all 47 species
Zm00001e005702_P001	PHYC, Zm00001e005702	phytochrome photoreceptor (PHY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003018	GAF	236	417
IPR013767	PAS_fold	635	750
IPR013767	PAS_fold	766	888
IPR013515	Phytochrome_cen-reg	430	603
IPR003594	HATPase_C	1022	1134
IPR013654	PAS_2	85	202

External Links

No external refs found!

Msp_g14224 (HY3, OOP1, PHYB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation