1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g14110

Msp_g14110


Description : not classified & original description: none


Gene families : OG0004721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004721_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g14110

Target Alias Description ECC score Gene Family Method Actions
AT3G02060 No alias DEAD/DEAH box helicase, putative 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021357.51 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dcu_g04126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g42734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR003711 CarD-like/TRCF_RID 204 299
IPR011545 DEAD/DEAH_box_helicase_dom 332 487
IPR001650 Helicase_C 535 634
No external refs found!