1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g13979

Msp_g13979


Description : not classified & original description: none


Gene families : OG0011726 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011726_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13979

Target Alias Description ECC score Gene Family Method Actions
Adi_g015292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0074.g037453 No alias not classified & original description: CDS=1-2481 0.03 OrthoFinder output from all 47 species
Ceric.36G054500.1 Ceric.36G054500 not classified & original description: pacid=50568462... 0.03 OrthoFinder output from all 47 species
Nbi_g40082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007478 No alias not classified & original description: CDS=1-2787 0.03 OrthoFinder output from all 47 species
Spa_g08139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 924 948
IPR002885 Pentatricopeptide_repeat 166 191
IPR002885 Pentatricopeptide_repeat 296 320
IPR002885 Pentatricopeptide_repeat 469 494
IPR002885 Pentatricopeptide_repeat 887 907
IPR002885 Pentatricopeptide_repeat 853 881
IPR002885 Pentatricopeptide_repeat 748 795
IPR002885 Pentatricopeptide_repeat 394 440
IPR002885 Pentatricopeptide_repeat 90 136
IPR002885 Pentatricopeptide_repeat 192 239
IPR002885 Pentatricopeptide_repeat 648 696
IPR002885 Pentatricopeptide_repeat 495 542
No external refs found!