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  5. Msp_g13943

Msp_g13943 (UPL3, KAK)


Aliases : UPL3, KAK

Description : E3 ubiquitin ligase *(UPL3) & original description: none


Gene families : OG0001729 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001729_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13943

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00100p00119160 UPL3, KAK,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT4G38600 UPL3, KAK HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.04 OrthoFinder output from all 47 species
Adi_g022382 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077989 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g49450 UPL3, KAK LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02725 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g14715 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47900 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20762 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13609 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G061600.1 UPL3, KAK,... E3 ubiquitin ligase *(UPL3) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.02G085400.1 UPL3, KAK,... E3 ubiquitin ligase *(UPL3) & original description:... 0.04 OrthoFinder output from all 47 species
Cre07.g312900 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Dac_g03421 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g20263 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g05114 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08697 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018731001 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01024033001 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
GSVIVT01025537001 UPL4 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_07121 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
Gb_07122 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
Gb_20276 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
LOC_Os02g01170.1 UPL3, KAK, LOC_Os02g01170 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
LOC_Os05g38830.1 UPL4, LOC_Os05g38830 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
Len_g18323 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
Len_g19132 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02474 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10428377g0020 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
MA_10434379g0010 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
MA_140610g0010 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
MA_62286g0020 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
Ore_g25162 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25807 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17671 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g44877 UPL4 E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29297 No alias E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g111530.3.1 UPL3, KAK, Solyc01g111530 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
Solyc10g055450.2.1 UPL3, KAK, Solyc10g055450 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
Spa_g17541 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g02200 UPL3, KAK E3 ubiquiTin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013385_P003 UPL3, KAK, Zm00001e013385 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
Zm00001e025424_P001 UPL3, KAK, Zm00001e025424 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000569 HECT_dom 1574 1921
No external refs found!