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  5. Msp_g13904

Msp_g13904 (RIF10, PNP)


Aliases : RIF10, PNP

Description : EC_2.7 transferase transferring phosphorus-containing group & original description: none


Gene families : OG0002534 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002534_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13904

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00095690 RIF10, PNP,... RNA processing.organelle machineries.ribonuclease... 0.05 OrthoFinder output from all 47 species
AT3G03710 RIF10, PNP polyribonucleotide nucleotidyltransferase, putative 0.03 OrthoFinder output from all 47 species
Ala_g20124 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Als_g32229 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Aop_g10994 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.07 OrthoFinder output from all 47 species
Cba_g07917 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ceric.07G039700.1 RIF10, PNP,... EC_2.7 transferase transferring phosphorus-containing... 0.06 OrthoFinder output from all 47 species
Dcu_g47719 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
GSVIVT01029958001 RIF10, PNP RNA processing.organelle machineries.ribonuclease... 0.05 OrthoFinder output from all 47 species
Gb_15670 RIF10, PNP polynucleotide phosphorylase (PNP) 0.05 OrthoFinder output from all 47 species
LOC_Os07g07310.1 RIF10, PNP,... polynucleotide phosphorylase (PNP) 0.02 OrthoFinder output from all 47 species
Len_g23960 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Mp4g17520.1 RIF10, PNP polynucleotide phosphorylase (PNP) 0.02 OrthoFinder output from all 47 species
Ore_g20554 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sam_g15795 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Solyc08g066120.4.1 RIF10, PNP,... polynucleotide phosphorylase (PNP) 0.04 OrthoFinder output from all 47 species
Spa_g04595 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Zm00001e032889_P001 RIF10, PNP,... polynucleotide phosphorylase (PNP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 768 830
IPR015847 ExoRNase_PH_dom2 236 298
IPR004088 KH_dom_type_1 694 752
IPR001247 ExoRNase_PH_dom1 102 232
IPR001247 ExoRNase_PH_dom1 455 588
No external refs found!