Msp_g13887


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13887
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Ala_g20462 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31319 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042638 No alias not classified & original description: CDS=1-2115 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.04 OrthoFinder output from all 47 species
Azfi_s0144.g051561 No alias not classified & original description: CDS=1-3123 0.03 OrthoFinder output from all 47 species
Azfi_s0154.g053516 No alias not classified & original description: CDS=1-1896 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0254.g060427 No alias not classified & original description: CDS=1-2130 0.05 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0451.g070770 No alias not classified & original description: CDS=1-2109 0.03 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g07278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67208 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G085500.1 CRR22, Ceric.01G085500 not classified & original description: pacid=50592662... 0.03 OrthoFinder output from all 47 species
Ceric.23G026100.1 Ceric.23G026100 not classified & original description: pacid=50611257... 0.05 OrthoFinder output from all 47 species
Ceric.29G083700.1 Ceric.29G083700 not classified & original description: pacid=50625623... 0.03 OrthoFinder output from all 47 species
Ceric.37G017500.1 VAC1, ECB2,... ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dde_g02319 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47763 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13702 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31826 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g36335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45103 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02334 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13365 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002603 CRR22 not classified & original description: CDS=1-2808 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004387 No alias not classified & original description: CDS=1-2973 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013724 No alias not classified & original description: CDS=1-1671 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016316 No alias not classified & original description: CDS=1-1953 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0190.g025256 No alias not classified & original description: CDS=1-3936 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0208.g025828 No alias not classified & original description: CDS=1-3132 0.04 OrthoFinder output from all 47 species
Sam_g39858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04234 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14175 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17848 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22163 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23501 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04732 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13474 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44241 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 458 484
IPR002885 Pentatricopeptide_repeat 226 250
IPR002885 Pentatricopeptide_repeat 853 880
IPR002885 Pentatricopeptide_repeat 573 598
IPR002885 Pentatricopeptide_repeat 487 515
IPR002885 Pentatricopeptide_repeat 367 416
IPR002885 Pentatricopeptide_repeat 252 298
IPR002885 Pentatricopeptide_repeat 600 647
IPR002885 Pentatricopeptide_repeat 718 764
IPR002885 Pentatricopeptide_repeat 150 197
No external refs found!