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  5. Msp_g13606

Msp_g13606 (CDT1, ATCDT1A, CDT1A)


Aliases : CDT1, ATCDT1A, CDT1A

Description : helicase auxiliary factor *(CDT1) & original description: none


Gene families : OG0007109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13606

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00068790 CDT1, ATCDT1A,... Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.05 OrthoFinder output from all 47 species
Als_g15053 CDT1, ATCDT1A, CDT1A helicase auxiliary factor *(CDT1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51250 CDT1B, CDT1, ATCDT1B helicase auxiliary factor *(CDT1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51251 CDT1, ATCDT1A, CDT1A helicase auxiliary factor *(CDT1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05243 CDT1, ATCDT1A, CDT1A helicase auxiliary factor *(CDT1) & original description: none 0.06 OrthoFinder output from all 47 species
Cre03.g163300 No alias Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.03 OrthoFinder output from all 47 species
GSVIVT01028303001 CDT1, ATCDT1A, CDT1A Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.04 OrthoFinder output from all 47 species
Gb_04601 CDT1, ATCDT1A, CDT1A helicase auxiliary factor (CDT1) 0.03 OrthoFinder output from all 47 species
LOC_Os04g10650.1 CDT1, ATCDT1A,... helicase auxiliary factor (CDT1) 0.09 OrthoFinder output from all 47 species
LOC_Os10g34820.2 CDT1, ATCDT1A,... helicase auxiliary factor (CDT1) 0.08 OrthoFinder output from all 47 species
Lfl_g29230 CDT1, ATCDT1A, CDT1A helicase auxiliary factor *(CDT1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_9011g0010 CDT1, ATCDT1A, CDT1A helicase auxiliary factor (CDT1) 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000487 CDT1, ATCDT1A, CDT1A helicase auxiliary factor *(CDT1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g27532 No alias helicase auxiliary factor *(CDT1) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g006140.4.1 CDT1, ATCDT1A,... helicase auxiliary factor (CDT1) 0.01 OrthoFinder output from all 47 species
Solyc03g019960.3.1 CDT1, ATCDT1A,... helicase auxiliary factor (CDT1) 0.04 OrthoFinder output from all 47 species
Solyc06g008510.3.1 CDT1, ATCDT1A,... helicase auxiliary factor (CDT1) 0.07 OrthoFinder output from all 47 species
Zm00001e006735_P001 CDT1, ATCDT1A,... helicase auxiliary factor (CDT1) 0.02 OrthoFinder output from all 47 species
Zm00001e036500_P001 CDT1, ATCDT1A,... helicase auxiliary factor (CDT1) 0.01 OrthoFinder output from all 47 species
Zm00001e041798_P001 CDT1, ATCDT1A,... helicase auxiliary factor (CDT1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA