Msp_g13395 (HSS, ARF1-BP, ARF2, ORE14)


Aliases : HSS, ARF1-BP, ARF2, ORE14

Description : ARF-type transcription factor & original description: none


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13395

Target Alias Description ECC score Gene Family Method Actions
Adi_g014256 ARF16 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098002 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06926 ARF1 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22072 ARF16 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12632 ARF16 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02982.t1 ARF6, Aspi01Gene02982 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05878.t1 ARF8, ATARF8,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g010679 ARF1 ARF-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0065.g035933 ARF6 not classified & original description: CDS=1-678 0.04 OrthoFinder output from all 47 species
Cba_g19055 ARF6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37448 ARF6 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75332 ARF6 ARF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.10G078200.1 ARF6, Ceric.10G078200 ARF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g14369 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g27461 ARF6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46643 HSS, ARF1-BP, ARF2, ORE14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015035001 ARF19, IAA22, ARF11 RNA biosynthesis.transcriptional activation.B3... 0.04 OrthoFinder output from all 47 species
Lfl_g07818 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31549 ARF16 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04470 ARF1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g08684 ARF6 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc12g042070.3.1 HSS, ARF1-BP,... transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Spa_g12615 ARF16 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47786 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56619 ARF6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013639_P001 ARF19, IAA22,... transcription factor (ARF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
BP GO:0009725 response to hormone IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 162 263
IPR010525 ARF_dom 288 369
No external refs found!