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  5. Msp_g13279

Msp_g13279


Description : not classified & original description: none


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13279

Target Alias Description ECC score Gene Family Method Actions
Aob_g35924 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g07195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30600.t1 Aspi01Gene30600 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38535.t1 Aspi01Gene38535 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g01999 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g05666 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g24691 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Len_g02811 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04914 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g32942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06898 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Tin_g31026 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e016368_P001 Zm00001e016368 actin filament-bundling factor (THRUMIN) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002109 Glutaredoxin 395 460
No external refs found!