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  5. Msp_g13153

Msp_g13153 (SEC5A)


Aliases : SEC5A

Description : component *(SEC5) of Exocyst complex & original description: none


Gene families : OG0003582 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003582_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13153
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Adi_g054733 SEC5A component *(SEC5) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02588 SEC5B component *(SEC5) of Exocyst complex & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11507 SEC5A component *(SEC5) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G007800.1 SEC5A, Ceric.19G007800 component *(SEC5) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01984 SEC5A component *(SEC5) of Exocyst complex & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g34450.1 SEC5A, LOC_Os04g34450 component SEC5 of Exocyst complex 0.05 OrthoFinder output from all 47 species
Lfl_g04241 SEC5A component *(SEC5) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g01630.1 SEC5B component SEC5 of Exocyst complex 0.03 OrthoFinder output from all 47 species
Nbi_g42488 SEC5A component *(SEC5) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37593 SEC5B component *(SEC5) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05106 SEC5A component *(SEC5) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Smo267231 SEC5B Vesicle trafficking.target membrane tethering.Exocyst... 0.02 OrthoFinder output from all 47 species
Solyc04g071350.3.1 SEC5A, Solyc04g071350 component SEC5 of Exocyst complex 0.03 OrthoFinder output from all 47 species
Zm00001e008147_P003 SEC5B, Zm00001e008147 Exocyst complex component SEC5B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e040866_P001 SEC5A, Zm00001e040866 component SEC5 of Exocyst complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR039481 EXOC2/Sec5_N_dom 177 1048
No external refs found!