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  5. Msp_g13118

Msp_g13118


Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0001402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13118
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT5G01330 PDC3 pyruvate decarboxylase-3 0.02 OrthoFinder output from all 47 species
Ceric.39G029800.1 Ceric.39G029800 EC_4.1 carbon-carbon lyase & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01024702001 No alias Carbohydrate metabolism.fermentation.alcoholic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0030976 thiamine pyrophosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR012000 Thiamin_PyroP_enz_cen_dom 234 348
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 36 202
IPR011766 TPP_enzyme_TPP-bd 443 566
No external refs found!