Smo69423 (PACid_15417239)


Aliases : PACid_15417239

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family member of WRKY Transcription Factor Group II-c WRKY DNA-binding protein 57 (WRKY57) CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657) BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 48 (TAIR:AT5G49520.1) Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798 Bacteria - 22429 Metazoa - 974 Fungi - 991 Plants - 531 Viruses - 0 Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|522241 : 95.1


Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo69423
Cluster HCCA cluster: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT1G64000 WRKY56, ATWRKY56 WRKY DNA-binding protein 56 0.01 Gene family
AT1G69310 ATWRKY57, WRKY57 WRKY DNA-binding protein 57 0.04 Gene family
AT4G26440 MSP3, ATWRKY34, WRKY34 WRKY DNA-binding protein 34 0.01 Gene family
AT5G41570 ATWRKY24, WRKY24 WRKY DNA-binding protein 24 0.01 Gene family
GSVIVT01008046001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
GSVIVT01019419001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
LOC_Os03g21710 Os03g0335200 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
LOC_Os09g25070 Os09g0417800 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Solyc02g080890.3.1 Solyc02g080890.3 No description available 0.01 Gene family
Solyc07g056280.3.1 Solyc07g056280.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc10g011910.3.1 Solyc10g011910.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Solyc10g084380.1.1 Solyc10g084380.1 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
Zm00001d038761 GRMZM2G401521 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003657 WRKY_dom 31 87
No external refs found!