Smo69413 (PACid_15417211)


Aliases : PACid_15417211

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity INVOLVED IN: regulation of transcription, DNA-dependent LOCATED IN: nucleus CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471) BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G32800.1) Has 5976 Blast hits to 5749 proteins in 268 species: Archae - 0 Bacteria - 0 Metazoa - 6 Fungi - 21 Plants - 5816 Viruses - 0 Other Eukaryotes - 133 (source: NCBI BLink). & (loc_os06g07030.1 : 92.0


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo69413
Cluster HCCA cluster: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT1G74930 ORA47 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G34410 RRTF1 redox responsive transcription factor 1 0.02 Gene family
GSVIVT01013905001 No alias No description available 0.02 Gene family
GSVIVT01013913001 No alias No description available 0.02 Gene family
GSVIVT01013916001 No alias No description available 0.03 Gene family
GSVIVT01013917001 No alias No description available 0.02 Gene family
GSVIVT01013918001 No alias No description available 0.02 Gene family
GSVIVT01013923001 No alias No description available 0.02 Gene family
GSVIVT01013929001 No alias No description available 0.03 Gene family
GSVIVT01013935001 No alias No description available 0.02 Gene family
GSVIVT01015037001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01020584001 No alias No description available 0.02 Gene family
GSVIVT01031747001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
GSVIVT01035502001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01036201001 No alias No description available 0.02 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
LOC_Os04g34970 Os04g0429050 No description available 0.03 Gene family
LOC_Os10g25170 Os10g0390800 No description available 0.01 Gene family
LOC_Os12g39330 Os12g0582900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc06g068360.3.1 Solyc06g068360.3 No description available 0.02 Gene family
Solyc07g053740.1.1 Solyc07g053740.1 No description available 0.02 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
Zm00001d002744 GRMZM2G172936 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d012585 GRMZM2G132185 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d018305 GRMZM2G110333 No description available 0.05 Gene family
Zm00001d025477 GRMZM2G424348 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d026182 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.01 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d047860 GRMZM2G007406 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d052152 GRMZM2G011110 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 16 65
No external refs found!