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  5. Msp_g12976

Msp_g12976


Description : not classified & original description: none


Gene families : OG0001699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001699_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12976

Target Alias Description ECC score Gene Family Method Actions
Aob_g03201 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043334 No alias not classified & original description: CDS=1-2907 0.03 OrthoFinder output from all 47 species
Azfi_s0112.g045765 SNM1, ATSNM1 not classified & original description: CDS=1-1590 0.03 OrthoFinder output from all 47 species
Dde_g12517 SNM1, ATSNM1 interstrand crosslink repair factor *(SNM) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01000444001 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g09000 SNM1, ATSNM1 interstrand crosslink repair factor *(SNM) & original... 0.04 OrthoFinder output from all 47 species
Mp1g24430.1 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR011084 DRMBL 216 345
No external refs found!