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  5. Msp_g12931

Msp_g12931 (SAG15, CLPD, ERD1)


Aliases : SAG15, CLPD, ERD1

Description : chaperone component *(ClpD) of chloroplast Clp-type protease complex & original description: none


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12931

Target Alias Description ECC score Gene Family Method Actions
AT5G15450 CLPB3, CLPB-P, APG6 casein lytic proteinase B3 0.02 OrthoFinder output from all 47 species
Adi_g010878 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12182 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08864 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Aspi01Gene27357.t1 CLPB3, CLPB-P,... organellar chaperone *(Clp-p/Clp-m) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47588.t1 CLPB3, CLPB-P,... organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G073100.1 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
GSVIVT01008635001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_36602 SAG15, CLPD, ERD1 chaperone component ClpD of chloroplast Clp-type protease complex 0.02 OrthoFinder output from all 47 species
LOC_Os02g32520.1 SAG15, CLPD,... chaperone component ClpD of chloroplast Clp-type protease complex 0.03 OrthoFinder output from all 47 species
LOC_Os04g32560.1 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.02 OrthoFinder output from all 47 species
Ore_g29985 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Spa_g38742 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species
Zm00001e008256_P006 SAG15, CLPD,... chaperone component ClpD of chloroplast Clp-type protease complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 878 956
IPR003959 ATPase_AAA_core 696 871
IPR004176 Clp_R_dom 120 166
IPR004176 Clp_R_dom 199 247
IPR041546 ClpA/ClpB_AAA_lid 478 550
IPR003959 ATPase_AAA_core 334 452
No external refs found!