Description : not classified & original description: none
Gene families : OG0011543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011543_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g14585 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.14G066900.1 | Ceric.14G066900 | not classified & original description: pacid=50633332... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g10324 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
MF | GO:0030976 | thiamine pyrophosphate binding | IEP | HCCA |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0050997 | quaternary ammonium group binding | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 130 | 178 |
IPR002885 | Pentatricopeptide_repeat | 528 | 575 |
IPR002885 | Pentatricopeptide_repeat | 830 | 878 |
IPR002885 | Pentatricopeptide_repeat | 1131 | 1179 |
IPR002885 | Pentatricopeptide_repeat | 629 | 675 |
IPR002885 | Pentatricopeptide_repeat | 932 | 978 |
IPR002885 | Pentatricopeptide_repeat | 228 | 275 |
IPR002885 | Pentatricopeptide_repeat | 326 | 372 |
IPR002885 | Pentatricopeptide_repeat | 1035 | 1060 |
IPR002885 | Pentatricopeptide_repeat | 1006 | 1032 |
IPR002885 | Pentatricopeptide_repeat | 431 | 459 |
IPR002885 | Pentatricopeptide_repeat | 733 | 762 |
IPR002885 | Pentatricopeptide_repeat | 1106 | 1129 |
IPR002885 | Pentatricopeptide_repeat | 202 | 225 |
IPR002885 | Pentatricopeptide_repeat | 704 | 727 |
IPR002885 | Pentatricopeptide_repeat | 1235 | 1264 |
No external refs found! |