Msp_g12623


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12623

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00182540 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00230160 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g20047 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g22000 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g24838 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g29330 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g42281 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g42628 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48795 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g14569 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g17592 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36547 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g37181 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06815 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g19033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30888 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02659 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g09092 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16217 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16780 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20429 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28688 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36477 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g70728 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene00921.t1 CRR2, Aspi01Gene00921 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02301.t1 Aspi01Gene02301 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02316.t1 Aspi01Gene02316 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02319.t1 Aspi01Gene02319 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02331.t1 Aspi01Gene02331 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02463.t1 Aspi01Gene02463 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02505.t1 Aspi01Gene02505 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02798.t1 Aspi01Gene02798 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05366.t1 VAC1, ECB2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05393.t1 Aspi01Gene05393 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05589.t1 CRK8, Aspi01Gene05589 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06807.t1 Aspi01Gene06807 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06826.t1 CRR2, Aspi01Gene06826 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07542.t1 Aspi01Gene07542 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07941.t1 LPA66, Aspi01Gene07941 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08082.t1 EMB2261, Aspi01Gene08082 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08990.t1 OTP84, Aspi01Gene08990 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10264.t1 Aspi01Gene10264 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10387.t1 REME1, Aspi01Gene10387 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12659.t1 Aspi01Gene12659 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14586.t1 Aspi01Gene14586 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14860.t1 Aspi01Gene14860 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene17383.t1 OTP84, Aspi01Gene17383 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18163.t1 CRR22, Aspi01Gene18163 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20467.t1 EMB2758, Aspi01Gene20467 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24209.t1 VAC1, ECB2,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25447.t1 Aspi01Gene25447 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t1 CRR22, Aspi01Gene25991 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26329.t1 Aspi01Gene26329 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27806.t1 CRR2, Aspi01Gene27806 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28610.t1 REME1, Aspi01Gene28610 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30154.t1 Aspi01Gene30154 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31317.t1 CRR28, Aspi01Gene31317 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31490.t1 Aspi01Gene31490 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34013.t1 Aspi01Gene34013 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34702.t1 Aspi01Gene34702 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34803.t1 Aspi01Gene34803 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35154.t1 Aspi01Gene35154 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37985.t1 DOT4, Aspi01Gene37985 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38168.t1 Aspi01Gene38168 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38545.t1 Aspi01Gene38545 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38554.t1 VAC1, ECB2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40915.t1 CRR22, Aspi01Gene40915 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41281.t1 OTP84, Aspi01Gene41281 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41379.t1 Aspi01Gene41379 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41775.t1 Aspi01Gene41775 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43278.t1 Aspi01Gene43278 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43974.t1 REME1, Aspi01Gene43974 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44451.t1 CRR2, Aspi01Gene44451 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46609.t1 CRR22, Aspi01Gene46609 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49892.t1 Aspi01Gene49892 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene52031.t2 Aspi01Gene52031 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52586.t1 Aspi01Gene52586 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54043.t1 Aspi01Gene54043 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55895.t1 Aspi01Gene55895 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56180.t1 EMB2758, Aspi01Gene56180 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58644.t1 Aspi01Gene58644 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene60513.t1 Aspi01Gene60513 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60910.t1 Aspi01Gene60910 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64480.t1 Aspi01Gene64480 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65137.t1 Aspi01Gene65137 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66061.t3 Aspi01Gene66061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67320.t1 EMB2758, Aspi01Gene67320 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71232.t1 CRR22, Aspi01Gene71232 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71401.t1 REME1, Aspi01Gene71401 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72349.t1 EMB2758, Aspi01Gene72349 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000814 CRR22 not classified & original description: CDS=1-2214 0.06 OrthoFinder output from all 47 species
Azfi_s0022.g016134 OTP84 not classified & original description: CDS=1-2358 0.07 OrthoFinder output from all 47 species
Azfi_s0251.g060294 No alias not classified & original description: CDS=1-879 0.06 OrthoFinder output from all 47 species
Cba_g02701 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06836 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g07437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14102 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g14728 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g16658 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20683 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20713 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g25572 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g29648 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35085 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g38342 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g45827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67785 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g68679 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g72789 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g74874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g77536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.05 OrthoFinder output from all 47 species
Dac_g03990 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g19560 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08424 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g30334 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36401 OTP86 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g49904 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g04853 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g46461 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os03g41530.1 LOC_Os03g41530 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Len_g04746 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g05041 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g05419 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g08128 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g08167 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17553 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18506 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18855 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18873 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18985 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g20943 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g29296 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g33284 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g36343 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g40128 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g44140 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g44381 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g07585 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17576 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g27237 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g03163 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g04305 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21730 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38538 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g24441 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26158 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03573 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g04714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g31283 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g47516 OTP85 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53018 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53554 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57818 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g26608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g051780.3.1 Solyc03g051780 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Spa_g23958 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20089 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22636 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26504 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g30433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41605 OTP81 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 198 225
No external refs found!