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  5. Msp_g12516

Msp_g12516


Description : starch granule initiation factor *(PTST3) & original description: none


Gene families : OG0006802 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006802_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12516

Target Alias Description ECC score Gene Family Method Actions
Aob_g16380 No alias starch granule initiation factor *(PTST3) & original... 0.02 OrthoFinder output from all 47 species
Sam_g22312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032640 AMPK1_CBM 411 498
No external refs found!