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  5. Msp_g12464

Msp_g12464


Description : not classified & original description: none


Gene families : OG0005834 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005834_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12464
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Adi_g041304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g00944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre03.g188650 No alias Probable plastid-lipid-associated protein 4,... 0.01 OrthoFinder output from all 47 species
Dac_g00501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022995001 No alias Probable plastid-lipid-associated protein 4,... 0.02 OrthoFinder output from all 47 species
Lfl_g00639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g00160.1 No alias Probable plastid-lipid-associated protein 4,... 0.02 OrthoFinder output from all 47 species
Pir_g35789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005397_P001 Zm00001e005397 Probable plastid-lipid-associated protein 4,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 91 250
No external refs found!