Msp_g12114


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12114
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT5G62460 No alias RING/FYVE/PHD zinc finger superfamily protein 0.04 OrthoFinder output from all 47 species
Als_g06624 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19239 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G004900.1 Ceric.22G004900 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.23G021200.1 Ceric.23G021200 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os02g36740.1 LOC_Os02g36740 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os08g33860.1 LOC_Os08g33860 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Nbi_g09753 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07989 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04496 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55963 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g37701 No alias E3 ubiquiTin ligase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 122 167
IPR022143 DUF3675 174 290
No external refs found!