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  5. Msp_g12104

Msp_g12104


Description : GTPase effector *(BDR) & original description: none


Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12104
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00115060 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Aev_g37858 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0050.g031036 No alias GTPase effector *(BDR) & original description: CDS=812-1645 0.03 OrthoFinder output from all 47 species
Ceric.25G061800.1 Ceric.25G061800 GTPase effector *(BDR) & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g37138 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033432001 No alias Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Gb_21083 No alias GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
LOC_Os10g27110.1 LOC_Os10g27110 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Len_g01245 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
MA_133920g0010 No alias GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Mp7g18900.1 No alias GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Msp_g15164 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04156 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06945 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g078190.4.1 Solyc04g078190 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035436_P001 Zm00001e035436 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR006873 DUF620 118 357
No external refs found!