1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g12102

Msp_g12102


Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface & original description: none


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12102

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g46780.1 LOC_Os04g46780 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Sam_g07433 No alias contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Solyc01g090910.3.1 PVA12, Solyc01g090910 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Tin_g20156 PVA12 contact site protein (VAP27) of... 0.04 OrthoFinder output from all 47 species
Zm00001e014355_P001 Zm00001e014355 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e023141_P002 Zm00001e023141 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Zm00001e023177_P005 Zm00001e023177 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 6 107
No external refs found!