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  5. Msp_g11549

Msp_g11549 (ATGID1C, GID1C)


Aliases : ATGID1C, GID1C

Description : gibberellin receptor *(GID1) & original description: none


Gene families : OG0000050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g11549

Target Alias Description ECC score Gene Family Method Actions
AT1G49650 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g07929 ATGID1C, GID1C not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os09g28660.1 ATCXE12, CXE12,... Probable carboxylesterase 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp8g06780.1 AtCXE18, CXE18 Carboxylesterase 1 OS=Actinidia eriantha... 0.03 OrthoFinder output from all 47 species
Ore_g30396 ATGID1C, GID1C gibberellin receptor *(GID1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05181 ATGID1C, GID1C not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g098390.3.1 ATGID1C, GID1C,... GID1-type gibberellin receptor 0.03 OrthoFinder output from all 47 species
Spa_g23078 ATGID1C, GID1C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003810_P001 CXE13, ATCXE13,... Probable carboxylesterase 13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e034367_P001 Zm00001e034367 Tuliposide A-converting enzyme 1, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0070037 rRNA (pseudouridine) methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 124 341
No external refs found!