Smo66769 (PACid_15410913)


Aliases : PACid_15410913

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family Encodes WRKY DNA-binding protein 26 (WRKY26). WRKY DNA-binding protein 26 (WRKY26) FUNCTIONS IN: sequence-specific DNA binding transcription factor activity INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription EXPRESSED IN: 10 plant structures EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657) BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 33 (TAIR:AT2G38470.1) Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798 Bacteria - 22429 Metazoa - 974 Fungi - 991 Plants - 531 Viruses - 0 Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os03g55164.2 : 169.0


Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo66769
Cluster HCCA cluster: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT1G62300 WRKY6, ATWRKY6 WRKY family transcription factor 0.02 Gene family
AT2G37260 WRKY44, TTG2,... WRKY family transcription factor family protein 0.02 Gene family
AT2G40750 WRKY54, ATWRKY54 WRKY DNA-binding protein 54 0.03 Gene family
AT3G01080 ATWRKY58, WRKY58 WRKY DNA-binding protein 58 0.02 Gene family
AT3G56400 ATWRKY70, WRKY70 WRKY DNA-binding protein 70 0.02 Gene family
AT5G46350 WRKY8, ATWRKY8 WRKY DNA-binding protein 8 0.02 Gene family
GSVIVT01034148001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01035426001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os01g40260 Os01g0584900 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os04g21950 Os04g0287400 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
LOC_Os05g46020 Os05g0537100 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os05g49100 Os05g0565900 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
MA_10434651g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_212937g0010 No alias No description available 0.02 Gene family
MA_88437g0010 No alias No description available 0.02 Gene family
Solyc01g095630.3.1 Solyc01g095630.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc02g032950.3.1 Solyc02g032950.3 No description available 0.02 Gene family
Solyc03g007380.2.1 Solyc03g007380.2 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc06g048870.2.1 Solyc06g048870.2 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Solyc12g096350.2.1 Solyc12g096350.2 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d011496 GRMZM2G411766 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d016457 GRMZM2G073272 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d017444 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Zm00001d023616 No alias No description available 0.01 Gene family
Zm00001d028962 GRMZM2G030272 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d038843 GRMZM5G863420 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Zm00001d040554 GRMZM2G327349 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d043569 GRMZM2G040298 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d044010 GRMZM2G408462 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d047309 GRMZM2G171428 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Zm00001d049173 GRMZM2G054125 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003657 WRKY_dom 102 158
No external refs found!