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  5. Msp_g11278

Msp_g11278 (ATATH6, ATH6)


Aliases : ATATH6, ATH6

Description : subfamily ABCA transporter & original description: none


Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g11278

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00139590 ATH16, ATATH16,... ABC transporter A family member 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G47770 ATH5, ATATH5, ABCA6 ABC2 homolog 5 0.04 OrthoFinder output from all 47 species
AT3G47790 ATH7, ATATH7 ABC2 homolog 7 0.07 OrthoFinder output from all 47 species
AT5G61700 ATH16, ATATH16 ABC2 homolog 16 0.05 OrthoFinder output from all 47 species
Aop_g04431 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g016229 ATATH6, ATH6 subfamily ABCA transporter & original description: CDS=234-3275 0.07 OrthoFinder output from all 47 species
Ceric.18G061500.1 ATATH6, ATH6,... subfamily ABCA transporter & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000057.67 ATATH4, ABCA5, ATH4 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Cre14.g618400 ATH7, ATATH7 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Cre17.g721000 ATH7, ATATH7 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Dac_g07523 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008040001 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
MA_119138g0010 ATATH6, ATH6 subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species
Mp5g00540.1 ATH7, ATATH7 subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species
Mp7g18420.1 ATH7, ATATH7 subfamily ABCA transporter 0.05 OrthoFinder output from all 47 species
Pir_g40039 ATH16, ATATH16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10749 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010130 ATH7, ATATH7 subfamily ABCA transporter & original description: CDS=142-3033 0.04 OrthoFinder output from all 47 species
Sam_g16539 No alias subfamily ABCA transporter & original description: none 0.04 OrthoFinder output from all 47 species
Smo171117 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo268954 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Solyc06g070950.2.1 ATATH6, ATH6,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 660 804
No external refs found!