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  5. Msp_g11066

Msp_g11066


Description : not classified & original description: none


Gene families : OG0001845 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001845_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g11066

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00074340 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G02170 No alias Remorin family protein 0.03 OrthoFinder output from all 47 species
Aop_g19734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011447 No alias not classified & original description: CDS=497-1966 0.03 OrthoFinder output from all 47 species
LOC_Os02g02500.1 LOC_Os02g02500 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g52920.1 LOC_Os04g52920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g28990.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g17160.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g08078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024675 No alias not classified & original description: CDS=2620-4236 0.02 OrthoFinder output from all 47 species
Smo99375 No alias No description available 0.05 OrthoFinder output from all 47 species
Spa_g40873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025360_P003 Zm00001e025360 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 416 519
No external refs found!