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  5. Msp_g10865

Msp_g10865 (ATRD22, RD22)


Aliases : ATRD22, RD22

Description : not classified & original description: none


Gene families : OG0000218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g10865

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00021460 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G25610 ATRD22, RD22 BURP domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g046811 PG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g075864 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g078180 PG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09864 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10463 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12782 PG2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g13160 PG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18865 PG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_39304 ATRD22, RD22 BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Len_g13687 ATRD22, RD22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29071 PG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05891 PG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20244 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019897_P001 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Zm00001e029096_P002 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR004873 BURP_dom 95 325
No external refs found!