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  5. Msp_g10794

Msp_g10794


Description : not classified & original description: none


Gene families : OG0012030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g10794
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Adi_g016407 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.31G060600.1 Ceric.31G060600 not classified & original description: pacid=50574962... 0.05 OrthoFinder output from all 47 species
Nbi_g10511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 312 358
IPR002885 Pentatricopeptide_repeat 582 609
IPR002885 Pentatricopeptide_repeat 484 508
IPR002885 Pentatricopeptide_repeat 387 409
IPR002885 Pentatricopeptide_repeat 509 556
IPR002885 Pentatricopeptide_repeat 711 758
IPR002885 Pentatricopeptide_repeat 611 658
No external refs found!