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  5. Msp_g10720

Msp_g10720 (HUA1)


Aliases : HUA1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0002527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g10720

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00115p00126760 HUA1,... RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
Aspi01Gene25821.t1 HUA1, Aspi01Gene25821 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
LOC_Os01g42970.1 HUA1, LOC_Os01g42970 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Pnu_g07887 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ppi_g12544 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 167 192
IPR000571 Znf_CCCH 339 364
IPR000571 Znf_CCCH 383 408
IPR000571 Znf_CCCH 114 138
IPR000571 Znf_CCCH 254 278
No external refs found!