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  5. Msp_g10616

Msp_g10616


Description : not classified & original description: none


Gene families : OG0002269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g10616

Target Alias Description ECC score Gene Family Method Actions
Aev_g37451 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g08012 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12318 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aspi01Gene27737.t1 Aspi01Gene27737 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0129.g048883 No alias not classified & original description: CDS=392-1735 0.06 OrthoFinder output from all 47 species
Cba_g05855 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z088200.1 Ceric.1Z088200 not classified & original description: pacid=50573450... 0.08 OrthoFinder output from all 47 species
Dac_g01643 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os12g07190.1 LOC_Os12g07190 CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Len_g58110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01913 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08747 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g09029 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015041 No alias not classified & original description: CDS=582-2252 0.03 OrthoFinder output from all 47 species
Sam_g17492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07739 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g01050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002870_P003 Zm00001e002870 CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 399 480
IPR000644 CBS_dom 51 96
IPR000644 CBS_dom 111 155
IPR000644 CBS_dom 220 266
IPR000644 CBS_dom 279 321
No external refs found!