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  5. Msp_g10001

Msp_g10001 (ARF6)


Aliases : ARF6

Description : ARF-type transcription factor & original description: none


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g10001

Target Alias Description ECC score Gene Family Method Actions
AT1G35540 ARF14 auxin response factor 14 0.04 OrthoFinder output from all 47 species
ATMG00940 ORF164 DNA binding 0.03 OrthoFinder output from all 47 species
Adi_g055832 ARF6 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11824 ARF6 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05299 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05878.t1 ARF8, ATARF8,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene53089.t1 HSS, ARF1-BP,... ARF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene64733.t1 HSS, ARF1-BP,... ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g27461 ARF6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36299 ARF6 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025691001 ARF16 RNA biosynthesis.transcriptional activation.B3... 0.04 OrthoFinder output from all 47 species
Sam_g39105 No alias ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49817 No alias ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g096070.3.1 ARF9, Solyc01g096070 transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
Zm00001e022728_P002 ARF1, Zm00001e022728 transcription factor (ARF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010525 ARF_dom 259 342
IPR003340 B3_DNA-bd 133 234
No external refs found!