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  5. Msp_g09565

Msp_g09565 (MGP)


Aliases : MGP

Description : C2H2 subclass IDD transcription factor & original description: none


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g09565

Target Alias Description ECC score Gene Family Method Actions
Aev_g48833 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g13784 AtIDD7, IDD7 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene21463.t1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008481 IDD16, AtIDD16 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g17431 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01011587001 IDD14, AtIDD14 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Gb_26087 IDD16, AtIDD16 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Ore_g16325 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g65810 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g22200 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g47248 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g15231 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g15232 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 60 82
No external refs found!