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  5. Msp_g09555

Msp_g09555


Description : not classified & original description: none


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g09555

Target Alias Description ECC score Gene Family Method Actions
AT2G44380 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
Ala_g32178 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0052.g031565 No alias not classified & original description: CDS=390-1478 0.03 OrthoFinder output from all 47 species
Ehy_g02288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05770 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g41920.1 LOC_Os07g41920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g31280.1 LOC_Os08g31280 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g20150.1 LOC_Os09g20150 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g40470.1 LOC_Os12g40470 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_279737g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g21651 AtAIRP1, AIRP1 E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 147 191
IPR004146 DC1 202 249
IPR004146 DC1 89 137
IPR004146 DC1 29 72
No external refs found!