Msp_g09543 (AGD8)

Aliases : AGD8

Description : class II ARF-GAP ARF-GTPase-activating protein & original description: none

Gene families : OG0001922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001922_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g09543
Cluster	HCCA: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method
Adi_g064067	AGD8	class II ARF-GAP ARF-GTPase-activating protein &...	0.02	OrthoFinder output from all 47 species
Als_g00881	AGD8	class II ARF-GAP ARF-GTPase-activating protein &...	0.03	OrthoFinder output from all 47 species
Ceric.01G027900.1	AGD8, Ceric.01G027900	class II ARF-GAP ARF-GTPase-activating protein &...	0.03	OrthoFinder output from all 47 species
LOC_Os03g63710.1	AGD8, LOC_Os03g63710	class II ARF-GAP ARF-GTPase-activating protein	0.03	OrthoFinder output from all 47 species
Len_g55685	AGD9	class II ARF-GAP ARF-GTPase-activating protein &...	0.03	OrthoFinder output from all 47 species
Nbi_g29700	AGD8	class II ARF-GAP ARF-GTPase-activating protein &...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013330	AGD9	class II ARF-GAP ARF-GTPase-activating protein &...	0.03	OrthoFinder output from all 47 species
Spa_g39446	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e011636_P001	AGD9, Zm00001e011636	class II ARF-GAP ARF-GTPase-activating protein	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005096	GTPase activator activity	IEA	Interproscan
MF	GO:0008047	enzyme activator activity	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	HCCA
MF	GO:0005199	structural constituent of cell wall	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001164	ArfGAP_dom	101	202

External Links

No external refs found!