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  5. Msp_g09026

Msp_g09026 (PLPB, PLPA, PLPC, PLP)


Aliases : PLPB, PLPA, PLPC, PLP

Description : UV-A/blue light photoreceptor *(PLP) & original description: none


Gene families : OG0002747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002747_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g09026

Target Alias Description ECC score Gene Family Method Actions
AT2G02710 PLPB, PLPA, PLPC, PLP PAS/LOV protein B 0.04 OrthoFinder output from all 47 species
Aob_g02173 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09053.t1 PLPB, PLPA,... UV-A/blue light photoreceptor *(PLP) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03233 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.04 OrthoFinder output from all 47 species
Mp8g05020.1 RPT1, PHOT1, NPH1, JK224 Phototropin-1A OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Sam_g25298 No alias UV-A/blue light photoreceptor *(PLP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g010480.3.1 PLPB, PLPA,... PLP UV-A/blue light photoreceptor 0.03 OrthoFinder output from all 47 species
Solyc05g007020.4.1 PLPB, PLPA,... PLP UV-A/blue light photoreceptor 0.03 OrthoFinder output from all 47 species
Tin_g09118 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000014 PAS 31 123
IPR000014 PAS 251 346
No external refs found!