Msp_g08990


Description : not classified & original description: none


Gene families : OG0000530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000530_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g08990

Target Alias Description ECC score Gene Family Method Actions
AT3G62630 No alias Protein of unknown function (DUF1645) 0.02 OrthoFinder output from all 47 species
Aev_g03170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g01949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009563001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os03g19090.1 LOC_Os03g19090 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g44920.1 LOC_Os11g44920 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g02030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_13470g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g00990.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g22129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g112700.1.1 Solyc03g112700 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g28385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001395_P001 Zm00001e001395 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e002860_P001 Zm00001e002860 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012442 DUF1645_plant 322 404
IPR012442 DUF1645_plant 486 526
IPR012442 DUF1645_plant 135 248
No external refs found!