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  5. Msp_g08855

Msp_g08855


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g08855

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00224090 evm_27.TU.AmTr_v1... B2 protein OS=Daucus carota 0.05 OrthoFinder output from all 47 species
AT3G27090 No alias DCD (Development and Cell Death) domain protein 0.02 OrthoFinder output from all 47 species
AT5G42050 No alias DCD (Development and Cell Death) domain protein 0.1 OrthoFinder output from all 47 species
Adi_g054418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25533 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g23478 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g37095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18482.t1 Aspi01Gene18482 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G074500.1 Ceric.16G074500 not classified & original description: pacid=50590002... 0.05 OrthoFinder output from all 47 species
Ceric.24G054900.1 Ceric.24G054900 not classified & original description: pacid=50628695... 0.03 OrthoFinder output from all 47 species
Dac_g37661 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ehy_g02597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019563001 No alias B2 protein OS=Daucus carota 0.04 OrthoFinder output from all 47 species
LOC_Os01g36950.1 LOC_Os01g36950 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 252.0) 0.05 OrthoFinder output from all 47 species
LOC_Os05g51590.1 LOC_Os05g51590 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 248.0) 0.03 OrthoFinder output from all 47 species
Len_g20732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g22859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_14999g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 266.0) 0.03 OrthoFinder output from all 47 species
MA_74199g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 236.0) 0.03 OrthoFinder output from all 47 species
Mp1g14410.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g32790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11201 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15439 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pir_g26521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g008370.3.1 Solyc08g008370 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 291.0) 0.06 OrthoFinder output from all 47 species
Solyc08g082610.4.1 Solyc08g082610 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 303.0) 0.04 OrthoFinder output from all 47 species
Spa_g04970 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020733_P001 Zm00001e020733 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 266.0) 0.05 OrthoFinder output from all 47 species
Zm00001e031056_P001 Zm00001e031056 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 182 307
No external refs found!