1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre06.g254150

Cre06.g254150


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.PWP2/UTP1 assembly factor


Gene families : OG_01_0005597 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005597_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g254150
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00059990 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
AT1G15440 PWP2, ATPWP2 periodic tryptophan protein 2 0.23 Archaeplastida
Cpa|evm.model.tig00000076.89 No alias Periodic tryptophan protein 2 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01017243001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
Gb_23048 No alias SSU processome assembly factor (UTP1/PWP2) 0.06 Archaeplastida
LOC_Os05g44320.1 No alias SSU processome assembly factor (UTP1/PWP2) 0.17 Archaeplastida
MA_138254g0010 No alias Periodic tryptophan protein 2 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_917430g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp1g17900.1 No alias SSU processome assembly factor (UTP1/PWP2) 0.28 Archaeplastida
Pp3c7_9990V3.1 No alias periodic tryptophan protein 2 0.11 Archaeplastida
Smo80929 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
Solyc03g120080.4.1 No alias SSU processome assembly factor (UTP1/PWP2) 0.15 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 372 408
IPR001680 WD40_repeat 134 167
IPR001680 WD40_repeat 542 579
IPR001680 WD40_repeat 457 493
IPR001680 WD40_repeat 420 450
IPR001680 WD40_repeat 596 625
IPR007148 SSU_processome_Utp12 831 960
No external refs found!