AMTR_s00017p00245450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00017.230

Description : PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0006721 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006721_tree ,
OG_02_0008444 (LandPlants) Phylogenetic Tree(s): OG_02_0008444_tree ,
OG_03_0010152 (SeedPlants) Phylogenetic Tree(s): OG_03_0010152_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00017p00245450
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cre16.g678851 No alias PsbP domain-containing protein 2, chloroplastic... 0.02 Archaeplastida
GSVIVT01022331001 No alias PsbP domain-containing protein 2, chloroplastic... 0.02 Archaeplastida
Mp5g12900.1 No alias PsbP domain-containing protein 2, chloroplastic... 0.01 LandPlants

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002683 PsbP_C 91 247
No external refs found!