Msp_g08660


Description : not classified & original description: none


Gene families : OG0000234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g08660

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0013.g013224 No alias not classified & original description: CDS=1-3375 0.05 OrthoFinder output from all 47 species
Cba_g19056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G047000.1 Ceric.02G047000 not classified & original description: pacid=50586228... 0.03 OrthoFinder output from all 47 species
Ceric.13G031100.1 Ceric.13G031100 not classified & original description: pacid=50635765... 0.03 OrthoFinder output from all 47 species
GSVIVT01026880001 No alias FT-interacting protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01036910001 No alias FT-interacting protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g44490.1 LOC_Os02g44490 no description available(sp|q9m2r0|ftip3_arath : 717.0) 0.02 OrthoFinder output from all 47 species
LOC_Os05g30750.5 LOC_Os05g30750 no description available(sp|q60ew9|ftip7_orysj : 1527.0) 0.02 OrthoFinder output from all 47 species
LOC_Os07g07070.1 LOC_Os07g07070 Protein QUIRKY OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g30020.1 LOC_Os07g30020 no description available(sp|q9m2r0|ftip3_arath : 1066.0) 0.04 OrthoFinder output from all 47 species
Len_g09644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15641 QKY not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10437213g0020 No alias no description available(sp|q9m2r0|ftip3_arath : 244.0) 0.03 OrthoFinder output from all 47 species
Ore_g04445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s1547.g028074 No alias not classified & original description: CDS=1-3048 0.03 OrthoFinder output from all 47 species
Smo411129 No alias Protein QUIRKY OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g094410.3.1 Solyc01g094410 no description available(sp|q9m2r0|ftip3_arath : 1084.0) 0.02 OrthoFinder output from all 47 species
Spa_g21398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21383 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e024540_P001 Zm00001e024540 no description available(sp|q60ew9|ftip7_orysj : 170.0) 0.04 OrthoFinder output from all 47 species
Zm00001e027004_P001 Zm00001e027004 no description available(sp|q9m2r0|ftip3_arath : 963.0) 0.02 OrthoFinder output from all 47 species
Zm00001e031802_P001 Zm00001e031802 no description available(sp|q9m2r0|ftip3_arath : 993.0) 0.03 OrthoFinder output from all 47 species
Zm00001e037594_P001 Zm00001e037594 no description available(sp|q60ew9|ftip7_orysj : 1495.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006359 regulation of transcription by RNA polymerase III IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 5 100
IPR000008 C2_dom 381 488
IPR000008 C2_dom 224 317
IPR000008 C2_dom 668 702
IPR000008 C2_dom 553 628
IPR013583 PRibTrfase_C 847 1002
No external refs found!