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  5. Msp_g08546

Msp_g08546 (BB2, BB)


Aliases : BB2, BB

Description : E3 ubiquitin ligase *(EOD1) & original description: none


Gene families : OG0000935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g08546

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00114060 BB2, BB,... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Cba_g10739 BB2, BB E3 ubiquitin ligase *(EOD1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G038500.1 Ceric.13G038500 RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.39G001700.1 Ceric.39G001700 RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
MA_8767494g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g03370 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g03621 BB2, BB E3 ubiquitin ligase *(EOD1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g087060.4.1 BB2, BB, Solyc01g087060 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004061 arylformamidase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019441 tryptophan catabolic process to kynurenine IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0070189 kynurenine metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 171 213
No external refs found!